BioClaw.DIRECTORY
Bioimage Analysis / Python package / CLI

OME-Zarr Python

Read, write, and inspect OME-Zarr image pyramids and labels from a Python workflow.

Best fit

Imaging teams preparing chunked, multiscale microscopy datasets for compatible viewers or storage.

What you need

A compatible Python environment and storage that supports the chosen Zarr workflow.

What to check

Check the OME-Zarr specification version and axes metadata against the downstream viewer before converting a large collection.