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Single-cell Analysis / Public data portal

EMBL-EBI Single Cell Expression Atlas

Search single-cell expression studies across species and inspect gene expression patterns within individual experiments.

Best fit

Researchers looking for public examples of how a gene is expressed across annotated cells.

What you need

A web browser and a gene identifier or study of interest.

What to check

Only included studies are searchable. Assay and annotation differences can limit cross-study comparisons.