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Single-cell Analysis / Public data portal

Allen Brain Cell Atlas

Browse reference brain cell expression and spatial data to compare annotated neural populations.

Best fit

Neuroscience researchers looking for public reference measurements in human or mouse brain.

What you need

A browser for exploration; local analyses need the files and metadata for the chosen release.

What to check

Tissue regions, species, measurements, and labels vary by collection. Choose a release that matches the question.